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Volume 110 Supplement 2

Jubilee Issue: Volume 110, Number 2 (May-June 2017)

Preserved organic matter in a fossil Ocean Continent Transition in the Alps: the example of Totalp, SE Switzerland


Evidence from ultraslow spreading mid-ocean ridges and both fossil and present-day Ocean–Continent Transitions (OCT) demonstrates that mantle serpentinization resulting from the interaction of mantle rock and water during tectonic exhumation is widespread. Observations at white smokers in modern ocean settings suggest that methane produced by serpentinization can support methanotrophic bio-systems, which use methane as the only source of carbon. An important question is whether such bio-systems are more generally pervasive in their association with serpentinized mantle in the subsurface. In this study, we examined whether there is evidence for such a methanotrophic system in exhumed serpentinized mantle at a magma-poor rifted continental margin, by probing for characteristic biological markers in these and associated sedimentary rocks in the Totalp unit of SE Switzerland. This unit represents a remnant of the former OCT of the southern Alpine Tethyan margin and was chosen because of its mild Alpine tectonic and low-grade metamorphic overprint during Alpine orogeny, hence giving potential for the preservation of indigenous organic matter (OM). Totalp samples are characterized by low organic carbon contents of 11–647 ppm. The majority of the samples contain hydrocarbons in the form of n-alkanes in the range C17–C36. Some sediments contain isoprenoids, for example pristane and phytane and a suite of steranes that are consistent with a marine origin for the OM preserved in the rocks. Traces of marine planktonic and bacterial OM are preserved in the serpentinized mantle and overlying sediments of this ancient Tethyan OCT, but there is no evidence that the OM has been generated from methanotrophic bio-systems.


Serpentinization is an important metamorphic exothermic hydration process potentially contributing chemical energy for anaerobic life, as well as thermal energy at oceanic hydrothermal vents (e.g. Shock et al. 2002; Jamtveit and Hammer 2012). Serpentinization converts olivine and pyroxene to serpentine, other Fe–Mg minerals (magnetite, brucite, talc) and free molecular hydrogen (Eq. 1). The Mg component of olivine may hydrate as follows:

$$2{\text{Mg}}_{2} {\text{SiO}}_{4} + \, 3{\text{H}}_{2} {\text{O }} \to {\text{ Mg}}_{3} {\text{Si}}_{2} {\text{O}}_{5} \left( {\text{OH}} \right)_{4} + {\text{ Mg}}\left( {\text{OH}} \right)_{2}$$

The Fe component of olivine contributes to forming serpentine by an analogous reaction and/or by reducing water

$$6{\text{Fe}}_{2} {\text{SiO}}_{4} + 7{\text{H}}_{2} {\text{O}} \to 3 {\text{Fe}}_{3} {\text{Si}}_{2} {\text{O}}_{5} \left( {\text{OH}} \right)_{4} + {\text{Fe}}_{3} {\text{O}}_{4} + {\text{H}}_{2}$$

It has been proposed (e.g. McCollom 2013) that molecular hydrogen can then reduce CO2 derived from carbonate and hydrogen carbonate in sea-derived pore waters to methane (CH4) at high pressure and temperature, via a Fischer–Tropsch-like reaction (Eq. 3).

$${\text{CO}}_{ 2} + 4{\text{H}}_{2} \to {\text{CH}}_{ 4} + 2{\text{H}}_{2} {\text{O}}$$

Serpentinized mantle rocks exposed along slow to ultraslow-spreading Mid-Ocean Ridges (MOR) show positive anomalies of methane and hydrogen in the overlying water column above active tectonic zones (Rona et al. 1987; Charlou et al. 1988; Rona et al. 1992; Bougault et al. 1993; Charlou and Donval 1993; Charlou et al. 1998; Gràcia et al. 2000; Kelley and Shank 2010). The abiotically produced methane can be anaerobically oxidised by methanotrophic bacteria using sulphate as the electron acceptor (Eq. 4).

$${\text{CH}}_{4} + {\text{SO}}_{4}^{2 - } \to {\text{HCO}}_{3}^{ - } + {\text{HS}}^{ - } + {\text{H}}_{2} {\text{O}}$$

Sulphate reducers are one of the dominant bacterial populations at hydrothermal vents (McCollom and Shock 1997). Furthermore, methanotrophic bacteria have been identified at Lost City (mid-Atlantic Ocean), a low-temperature alkaline hydrothermal vent supported by energy derived from the formation of serpentinite (Hinrichs et al. 2000; Kelley et al. 2001; Orphan et al. 2001; Kelley et al. 2005). Recently, bacterial anaerobic nitrate oxidation of methane has been demonstrated in the laboratory (Haroon et al. 2013; Arshad et al. 2015), using two different microorganisms (Raghoebarsing et al. 2006); this may also occur at the MOR methane sources, but is likely to be a minor pathway as nitrate concentrations in seawater are significantly lower than sulphate (μM vs. mM, respectively).

Recent studies have focussed on the relationship between serpentinization and organic compounds, mainly methane in the laboratory (e.g. McCollom and Seewald 2013; Etiope and Ionescu 2014), at present-day serpentinite-hosted hydrothermal vents (e.g. Kelley et al. 2005; Delacour et al. 2008; Proskurowski et al. 2008), mud volcanoes (e.g. Mottl et al. 2003; Holm et al. 2006), and exhumed serpentinite mantle domains with high H2 concentrations and high pH (e.g. Cardace et al. 2013). High concentrations of OM found at the Mid-Atlantic Ridge (MAR; 4–6°N) were associated with serpentinized peridotite rather than with the hydrothermal vents (Ménez et al. 2012).

Hence, the present study uses an organic geochemical approach to quantify OM in the exhumed mantle from an OCT in order to better understand the relationship between OM and mantle serpentinization. We selected the Totalp unit exposed in the Eastern Swiss Alps, which represents a remnant of the fossil Tethyan OCT emplaced during the Alpine orogeny (Fig. 1a; Weissert and Bernoulli 1985; Manatschal et al. 2003; Picazo et al. 2013). We searched for biomarkers or molecular remains of former living organisms, specifically hydrocarbons with an origin consistent with anaerobic methane oxidation (e.g. crocetane; Blumenberg et al. 2004). A wider suite of biomarkers was used to determine source and thermal maturity of OM preserved in the rocks.

Fig. 1

Maps showing location and geology of the Totalp area. a Location of the Totalp area in the tectonic map of the Alps (from Schmid et al. 2004; modified by Mohn et al. 2010). b Location of Totalp as a part of the South Penninic units in Grisons (Manatschal et al. 2003). c Geological map of Totalp (modified from Picazo et al. 2013) showing location of the analysed samples as well as the distribution of the major lithologies and samples described in this study (for description of samples see Table 1)

Regional geological setting of the Totalp unit

The Totalp unit is located north of Davos in SE Switzerland. It is part of the Tethyan OCT (Fig. 1b). The peculiarity of the Totalp unit is that it experienced little Alpine deformation and only a low grade Alpine metamorphic overprint, not exceeding 100–150 °C, i.e. prehnite-pumpellyite grade (Peters 1968; Früh-Green et al. 1990). The Totalp unit consists of two Alpine tectonic units namely the Upper and Lower Ultramafic Totalp sub-units (e.g. Picazo et al. 2013). These are mainly composed of serpentinized peridotite exhumed at the seafloor during Jurassic times and ophicalcites that occur at the top basement; they can be found re-worked into the overlying Jurassic marine sediments (Fig. 1c). In addition, the primary contacts between the exhumed serpentinized mantle, the ophicalcites and the oceanic sediments are well-preserved (Weissert and Bernoulli 1985).

Pre-Alpine and Alpine geological and thermal history

The serpentinized peridotites of the Totalp unit were exhumed to the Jurassic seafloor during final late Middle Jurassic rifting (Peters and Stettler 1987; Bernoulli et al. 2003). Later, during the Alpine orogeny, the exhumed mantle rocks were first tectonically emplaced within a Late Cretaceous E-W directed nappe stack before being thrusted during the Tertiary collision over the European units forming the present-day Alpine orogen (Weissert and Bernoulli 1985; Früh-Green et al. 1990; Manatschal et al. 2003). The serpentinized peridotites in Totalp are interpreted as derived from fertile subcontinental lithospheric mantle (Manatschal et al. 2001; Müntener et al. 2010; van Acken et al. 2010), similar to other described remnants of fossil OCTs from the Alps (e.g. Platta; Desmurs et al. 2002; Malenco in the Italian Alps; Müntener et al. 2004). Extensional faults and unroofing of their footwalls are responsible for the mantle exposure at the seafloor (Picazo et al. 2013).


The Totalp unit consists mainly of serpentinized peridotites, ophicalcites and post-rift sediments (Figs. 1 and 2; Table 1). This association is typical of an OCT across magma-poor margins where magmatic rocks are often either very rare or absent. Three types of serpentinized mantle rocks were identified:

  1. (i)

    Massive serpentinized peridotites, which preserve mantle textures and mainly consist of serpentinized spinel-lherzolite. Locally these rocks also contain pyroxenite and amphibole- and chlorite-rich layers (Picazo et al. 2013).

  2. (ii)

    During exhumation, the serpentinized peridotites are affected by localization of the deformation and intensive fluid circulation leading to complete serpentinization of fault-rocks, including serpentinite gouges, serpentinite cataclasites and foliated cataclasites (Picazo et al. 2013). These rocks are best exposed in the Obersasställi area, and they occur in the uppermost 150 m of the exhumed mantle in the footwall of a Jurassic extensional detachment fault (Figs. 1 and 2; Picazo et al. 2013).

  3. (iii)

    Veins of serpentine that have been interpreted to result from later serpentinization during low-grade Alpine metamorphism, as suggested by the oxygen isotopes (Früh-Green et al. 1990). Some serpentine veins may result from the percolation of meteoric water associated with regional metamorphism (Burkhard and O’Neil 1988).

Ophicalcites are complex rocks that are made of serpentinite and calcite and represent the result of different processes (Bernoulli and Weissert 1985; Lemoine et al. 1987). They either result from the total to partial in situ replacement of serpentine by carbonate, tectonic processes related to exhumation and hydrothermal systems, and/or cementation and filling of fractures by sediments (e.g. neptunian dykes of Bernoulli and Jenkyns 2009). These processes occur at or near the seafloor and are often associated with hydrothermal fluid circulation at temperatures of 100–150 °C (Früh-Green et al. 1990; Picazo et al. 2013). Most ophicalcites are formed under static (non tectonic) conditions within 20 m of the paleo-seafloor (Picazo et al. 2013).

Fig. 2

Sketch showing the lithologies and the stratigraphy of the Totalp area (Weissert and Bernoulli 1985; Früh-Green et al. 1990; Manatschal et al. 2003; Picazo et al. 2013)

Table 1 Results by lithology including mineralogy and texture observed in hand specimens and the texture on the calcites used for the isotopic analyses (δ13CVPDB, δ18OVPDB)

Sedimentary ophicalcites at Totalp include neptunian dykes and debris-flows (Fig. 2). The neptunian dykes are carbonate veins filled with pink or grey carbonate (pelagic sediments or mechanically reworked cements), filling fractures in the exhumed mantle. These dykes are typically located in the tectonized, serpentinized peridotites forming the uppermost few meters of the exhumed mantle (Bernoulli and Weissert 1985; Picazo et al. 2013). The second main type, the tectono-sedimentary ophicalcites, include cemented clasts of serpentinite, gabbro and continental basement (Manatschal and Bernoulli 1999; Bernoulli et al. 2003; Picazo et al. 2013).

The sediments overlying the ophicalcite are mainly pelagic deposits of Late Jurassic to Early Cretaceous age, some of which have been reworked (most likely by ocean bottom currents) (Weissert and Bernoulli 1985). Red shales are overlain by radiolarian cherts and grey micritic limestones intercalated with claystones (e.g. Radiolarite Formation and Calpionella or Aptychus limestone Formation of Weissert and Bernoulli 1985). The top of the sequence is formed by black siliceous shales that are characteristic of poorly oxygenated bottom waters during the Early Cretaceous (Weissert et al. 1985; Weissert and Bernoulli 1985).

North east of Totalp, exposed on a topographic cliff near Gotschnagrat (Figs. 1 and 2), is a weathered outcrop with visible pyrite on the top of the radiolarian cherts and siliceous claystones (Fig. 3; Weissert and Bernoulli 1985). This outcrop has been described by Früh-Green et al. (1990) as a zone of pyrite mineralization associated with radiolarian cherts. The radiolarites contain quartz, illite, hematite and chlorite (Weissert and Bernoulli 1985). The sulphidized outcrop has a bulk chemistry different from its surrounding and could have been formed during early diagenesis or metasomatism of amorphous silica or limestone (Berner 1984; Williams et al. 1985). Alternatively, the sulphide could be related to a fossil

Fig. 3

The sulphide bearing outcrop in the Totalp area showing weathered lithology. Red circles are the sampling location in this outcrop. In the line-drawing on the right, light red identifies radiolarian cherts, dark red siliceous shale and yellow sulphate rich carbonate, rich in silica. a Zoom of outcrop. b Sample 65 is composed by calcite 50%. 25% quartz and is highly weathered. c Sample shows visible hematite crystals and calcite as the major mineral. d Sample 60 shows a siliceous rock with 3 different colours composed by 83% quartz, 10% albite and pyrite, illite and chlorite

hydrothermal system (e.g. Styrt et al. 1981, Beard and Hopkinson 2000; Zeng et al. 2015). Early diagenetic reactions producing pyrite depend inter alia on a source of OM as electron donor (Fig. 3b); the high present-day porosity of the rock (Fig. 3c) could be produced by weathering of calcite (Berner 1984). Hydrothermal vent systems are characterized by pelagic sediment accumulation alongside ferrous oxides (i.e. radiolarian chert) of hydrothermal origin which can potentially be preserved (Haymon 1989; Montgomery and Kerr 2009). The second most common mineral in the sulphide bearing samples is quartz that may have originated from amorphous silica or opal, which are common in hydrothermal vents (e.g. MAR- mount Saldanha 36°30′N; Dias and Barriga 2006, 25°48′N Rona 1984, 24°21′N; Rona 1984; Kane 23°35′N Fracture zone; Kelley and Delaney 1987) reflecting a large input of hydrothermal silica (Dias and Barriga 2006). There is no evidence of fossilized worm tubes associated with the zone of pyrite mineralization; these are characteristic of inactive white smokers (Haymon 1983) and so the origin of this formation remains unclear.

Sample collection, preparation and analysis

Sample collection

A total of 47 samples were selected from the Totalp unit for geological and organic geochemical studies (Table 1). We collected samples from the three main lithologies: serpentinized mantle rock (lizardite, serpentinite gouge and cataclasite), ophicalcites (neptunian dykes and tectono-sedimentary breccias) and associated sediments (Figs. 1 and 2; Table 1). Samples were oriented, geo-referenced and collected using a geological hammer or a hand drill using water as lubricant. On collection the samples were wrapped in pre-combusted foil (400 °C) for return to the laboratory.

Sample preparation

In order to avoid contamination with modern material the samples were cleaned with de-ionised water (18 MΩ cm−1 resistivity; Milli-Q) and rinsed with re-distilled dichloromethane (DCM). The outer edges were removed from each sample, which was then cut into smaller pieces using a small rock saw lubricated with water. The aim was to get fresh, un-weathered samples for laboratory analysis. These were then used for preparing thin sections and for stable isotope analyses of carbonate veins, with 90–110 μg of calcite being extracted using a small electrical hand drill. For organic geochemistry selected pieces were washed with Milli-Q water and DCM, then crushed (to particles <50 μm) using a tungsten Tema Mill, which was previously thoroughly cleaned (Decon-90 solution 2% v/v, milli-Q water, methanol and finally DCM). In order to assess lab contamination, blanks composed of pre-combusted silica gel (600 °C) were subjected to the same procedures as the samples.

Mineralogical analyses

Optical microscopy, cathodoluminescence microscopy (CL; CITL Mk5-2) and X-ray diffraction (XRD) were used to identify the mineralogy, chemistry, texture and textural relations within the samples and to associate the mineralogy with the OM. A Panalytical X’Pert PRO XRD system (CuK−α radiation, 45 kV, 40 mA) was used to identify the volume proportions of the minerals associated with serpentinization and the polytypes of the serpentine minerals.

Geochemical analyses

Analyses of total carbon (TC) and total organic carbon (TOC) were performed before and after decarbonation (10% HCL, 25 °C), respectively, using a Carlo Erba Instrument NC2500 elemental analyser.

Stable isotopic analyses of organic carbon were carried out on five samples of four different lithologies, prepared using a “sealed tube” method and injecting the resulting CO2 into a VG Sira 10 dual-inlet mass spectrometer (Craig 1957; Frazer and Crawford 1963; Sofer 1980). The standard error for analysis is ±0.1‰. The isotope data was normalized to IAEA-CH7 calibration material and reported using the VPDB scale. Carbon and oxygen isotope measurements on calcite were performed on material extracted from veins by conversion to CO2 using a VG SIRA 10 MS Isocarb (common acid bath). The carbon and the oxygen isotope analyses are referenced to the VPDB standard with a standard error for each analysis of ±0.1‰ (McCrea 1950; Craig 1957; Friedman and O’Neil 1977; Swart et al. 1991).

Soxhlet extraction was used to extract the bitumen from the powdered rocks using DCM: methanol (ratio 9:1) (24 h) (modified after Wolff et al. 1995). Full blank extractions were conducted in parallel to identify any possible contamination. After evaporation of the solvent, the extracts were re-dissolved and passed through short columns of alumina and sodium sulphate using hexane as solvent to isolate the hydrocarbons. The eluent from the alumina column was re-dissolved in hexane (50 μL) and analysed by gas chromatography (GC) and GC-mass spectrometry (GC–MS).

For GC–MS we used a GC Trace 1300 and Thermoquest ISQMS single quadrupole fitted with a split-splitless injector, GC column (DB-5MS non-polar 5% phenyl and 95% methyl silicone stationary phase, 60 mm × 0.25 mm i.d., film thickness 0.1 μm) using helium as a carrier gas (2 mL min−1). The GC oven temperature was programmed from 60 to 170 °C after 1 min at 6 °C min−1, then from 170 to 315 °C at 2.5 °C min−1 and finally held at 315 °C for 15 min. GC–MS was carried out in full data acquisition mode, providing mass spectra of compounds eluting from 20 to 90 min; these were identified by comparison with the literature and with authentic standards where available (PAHs-polynuclear aromatic hydrocarbons). 5α(H)-Cholestane was used as an external standard for quantification; response factors were assumed to be 1, hence data are semi-quantitative. Data were processed using XCalibur 1.2 software (ThermoScientific).

The mean carbon numbers, MC# (Peltzer and Gagosian 1989) and the carbon preference index (CPI) of n-alkanes (Peters et al. 2005a) were calculated over the carbon number range C20–C37 (Eqs. 5 and 6; Table 2).

$${\text{MC}}\# = \sum \left( {\left[ {C_{i} } \right] \, x \, C_{i} } \right)/\sum \left[ {C_{i} } \right]$$

where [C i ] = concentration of the n-alkane with C i carbon number

$${\text{CPI}} = \, 0.5x\sum \left( {\left[ {{\text{odd }}C_{21} {-} \, C_{35} } \right]} \right)/\left( {\left[ {{\text{even }}C_{20} - C_{34} } \right] + \sum \, \left[ {{\text{odd }}C_{23} {-}C_{37} } \right]/\sum \, \left[ {{\text{even }}C_{22} - C_{36} } \right]} \right)$$
Table 2 Results by lithology including TC, TOC and total HC concentration in ppm (parts per million) and organic carbon isotopic composition of bulk rock δ13Corganic

Carbon and hydrocarbon distributions in the analysed lithologies

The TOC and TC results are summarized in Table 2 and vary considerably. The TOC values are low, while TC reflect carbonate contents. The stable isotopic composition of carbonate varied from −0.78 to 1.86‰VPDB and −11.7 to −6.2‰VPDB for δ13C and δ18O, respectively (Table 2; Fig. 4). Five decarbonated samples (sample 1: neptunian dyke; samples 9 and 39: reworked tectono-sedimentary ophicalcite; sample 19: limestone; sample 69: specimen from the sulphide-rich outcrop) have similar values for δ13CVPDB organic of between −27.4 and −26.2‰ (Table 2).

Fig. 4

a Global range of carbon isotopic composition of carbonates precipitated during early diagenetic processes (modified after Coleman et al. 1993; Kiriakoulakis 1997; Heydari 1997). b Carbon and oxygen isotopic composition of calcite veins in Totalp samples. c Limestone (sample 19) showing two generations of calcite veins

Hydrocarbons (HCs) identified in Totalp samples include n-alkanes, steranes, polynuclear aromatic hydrocarbons (PAHs), hopanes and isoprenoids, namely pristane and phytane. Samples of the same lithology do not necessarily have similar distributions of HCs (Table 2). This may reflect the heterogeneity of the samples collected, for example in the relative amount of carbonate, calcite veins and serpentinite clasts.

Aliphatic compounds (>C15), mainly in the form of n-alkanes dominate (Fig. 5a). The CPI (carbon preference index) for the n-alkanes are in the range 1 ± 0.3, except for two samples that were visibly weathered, having CPI = 2.6–2.87, i.e. an odd over even ratio for the n-alkanes confirming contamination from modern material, such as soil (e.g. Villanueva et al. 1997). Steranes included 20R and 20S αββ isomers from C27 to C29, as well as 20 R and S diacholestane and pseudohomologues (Fig. 5b). The steranes were dominated by C27 compounds with a lower abundance of C28 and C29 pseudo-homologues (Fig. 5b). The ranges of values for the thermal maturity parameters of the C27 steranes are between 0.41 and 0.69 for ST1 = ααα 20S/ααα20S + ααα 20R and 0.37 and 0.59 for ST2 = αββ/ααα + αββ (Fig. 6; Seifert and Moldowan 1980; Peters et al. 2005b). PAHs having molecular masses ≤276 were identified in some of the bitumen extracts (Table 2; Fig. 5c).

Fig. 5

Representative mass chromatograms of the HCs of a typical sample of limestone (sample 10) and a siliceous rock from the sulphide rich outcrop of Totalp (sample 60). a n-alkanes (m/z 85) of sample 10 (limestone) b sterane distribution (m/z 217, 218) of sample 60 c PAH distribution (m/z 178, 192, 202, 228) of sample 60. For abbreviations see appendix

Fig. 6

Thermal maturity parameters of C27 steranes for Totalp samples. The classification is from Peters et al. 2005a. The brown shaded area represents the range of complete isomerization for the 20S/(20S + 20R) ααα C27 steranes (ca. 55%) and αββ/(ααα + αββ) C27 steranes (ca. 68%)


All serpentinite samples contain n-alkanes, and several PAHs in the form of phenanthrene (P) and fluoranthene (Fluo); steranes and hopanes were largely absent (Table 2).

Upper ultramafic sub-unit

Massive serpentinite

The massive serpentinites collected from the Weissfluhjoch (samples 77, 78; Fig. 1c; Table 1) area have HC concentrations between 0.05 and 4 ppm while the C29 n-alkane dominates their distribution (Cmax = 29; Table 2). Total carbon (454 ppm) and total organic carbon (TOC) (≈180 ppm) concentrations are both very low.

Lower ultramafic sub-unit

Massive serpentinite

XRD analysis shows a lizardite polytype 1 (Bailey 1969) (87%), garnet (andradite) (7%) and pyroxene (clinopyroxene) (5%). In thin section olivine is completely replaced by serpentine minerals, with phantoms of pyroxene, euhedral magnetite, spinel and several calcite and carbonate veins not visible to the naked eye (Table 1).

HC concentrations vary from 23 ppm for the serpentinite from Parsenfurgga (sample 5) to 900 ppm from an outcrop with ophicalcite in Obersasställi (sample 16; Fig. 1c; Table 2). The TOC values range from 102 to 176 ppm and TC from 395 to 3134 ppm; steranes and hopanes are below detection limits (BDL) (Table 2). Serpentinite samples showing numerous calcite veins (sample 24, 26, 44 and 47) have higher amounts of TC (20400–42500 ppm). They show variable TOC (19–135 ppm) and low HC concentrations (1–124 ppm). In the lower ultramafic sub-unit a red coloured serpentinite was identified by XRD to contain hematite (4%) (Table 1). The serpentine mineral is a lizardite polytype 1 (59%), also containing talc (18%) and calcite (19%). The isotopic composition of the calcite in the veins is 0.03 and −11.75‰ for δ13CVPDB and δ18OVPDB, respectively (Fig. 4).

Serpentinite cataclasite and gouges

The serpentine cataclasites and gouges have TC of 540–875 ppm, n-alkanes with a carbon number range of C17–C36 and no detectable steranes or hopanes (Tables 1 and 2). The serpentine cataclasites (sample 70), which are less deformed than the serpentine gouge (sample 69), contain more hydrocarbons (46 and 3 ppm, respectively Table 2) but similar TOC contents (284 and 269 ppm, respectively).


The ophicalcites from the Totalp unit all contain n-alkanes and the PAHs (P, Fluo and Pyr, see glossary; Table 2). Steranes and hopanes are also present in the majority of samples.

Neptunian dykes

Samples of neptunian dykes have a red micritic limestone matrix with millimetre-scale serpentinite clasts and calcite veins (samples 1, 23) (Fig. 1c; Table 1). The δ13CVPDB organic of one of the samples (sample 1) was −27.1‰ (Table 2). There are high amounts of TC with variable TOC (15–103 ppm) and HC concentrations (0.3–121 ppm) (Table 2).

Tectono-sedimentary ophicalcites

The tectono-sedimentary ophicalcite has various sub-lithologies from a reworked tectono-sedimentary breccia with folded serpentinized and carbonate clasts in a red carbonate matrix crosscut by calcite veins (sample 9) to centimetre scale serpentinite clasts in a carbonate vein (sample 72) (Fig. 1c; Table 1). The stable isotopic composition δ13CVPDB organic of one of the samples was −26.1‰ (sample 9) (Table 2). A second type of ophicalcite, a serpentinite breccia composed only of serpentinite clasts fragmented by calcite veins has low TOC (30 ppm) and HCs concentrations (124 ppm) including only n-alkanes (sample 72) (Table 2). The isotopic compositions of the calcite veins surrounding the serpentinite clast are 1.60‰ and −10.6‰ VPDB for δ13C and δ18O, respectively. The third most common ophicalcite is composed of anhedral serpentinite clasts, carbonate veins, calcite veinlets in a reddish pelagic matrix and has a low amount of TOC (11–116 ppm), but high concentrations of HCs (2–2470 ppm) (samples 21, 25, 39, 41, 42, 44, 66; Fig. 1c; Tables 1 and 2). The isotopic composition of the samples varies from δ13CVPDB = 0.32‰, 0.42‰ and 0.58‰ with δ18OVPDB = −11.75‰, −10.28‰ and −10.9‰ (for samples 25, 42 and 39 respectively) to δ13CVPDB = 1.07 and 1.78‰ with δ18OVPDB = −11.7 to −7‰ for samples 42 (second generation calcite vein) and 41 (Fig. 4; Table 1). Isotopic analysis of organic carbon (sample 39) gave δ13CVPDB organic = −27.4‰ (Table 2). The ophicalcite outcrop near the Gotschnagrat NE Totalp has isotopic values for calcite veins of 1.86‰ for δ13CVPDB and −6.2‰ for δ18OVPDB (sample 66).


Limestones are, together with radiolarian cherts, the most common sediments in the Totalp unit. All of the sediment samples contain detectable levels of HCs including PAHs.

Radiolarian cherts

The radiolarian cherts are situated mostly around the Gotschnagrat NE Totalp (samples 62, 68) and along small distributed outcrops some of which are 1–2 m in length and located between Parsennfurgga and Parsenhütte (sample 6; Fig. 1c). Except for the weathered sample, they have very low concentrations of HCs (1–17 ppm) and low TOC values (66–187 ppm) (Table 2). The radiolarian cherts are hard, fine grained siliceous sediments that are transected by post–depositional quartz and calcite veins, the latter having isotopic compositions of δ13CVPDB = −0.79‰ and δ18OVPDB = −6.4‰ (Sample 62; Table 1; Fig. 4).

Siliceous shales

The siliceous shales are located mostly above Parsennhütte and around the Gotschnagrat (samples 15, 18, 60, 61; Fig. 1c). XRD analysis of the siliceous shales (sample 61) above the pyrite rich area revealed a mineralogical composition consisting of quartz (83%), albite (10%), pyrite (2%), illite/muscovite (4%), chlorite and hematite. This composition is similar to the siliceous shale (samples 15, 18) found nearby, which consists of quartz (89%), plagioclases (6%), illite/muscovite (4%), chlorite and trace of hematite (Fig. 1c; Table 1). They have low concentrations of HCs (13–144 ppm) and variable amounts of TOC (194–433 ppm) (Table 2).


Samples (53–57) are pelagic grey limestones that contain visible calcite veinlets and fine greyish veinlets (serpentinite) from the syncline in the Parsennhütte (Fig. 1c; Table 1). They contain a low amount of TOC (14–92 ppm) and variable concentrations of HCs (Table 2).

The pelagic limestones with higher amount of calcite veins (samples 10, 19) are also poor in TOC (74–82 ppm) and contain HCs from 79 to 171 ppm (Fig. 1c; Tables 1 and 2). Isotopic analyses of the first generation of calcite veins in sample 19 show δ13CVPDB = 0.56‰ and δ18OVPDB = −6.5‰ and δ13CVPDB organic = −26.6‰ (Fig. 4; Table 1).

Silica-rich carbonate (sulphide-rich outcrop)

The mineralogy of the pyrite rich rocks is dominated by calcite (53%) with quartz (24%), chlorite (12%) and pyrite (6%) being the other main minerals (sample 63, 64, 65; Figs. 1c and 3; Table 1). The samples were on the top of the radiolarian chert and red shale sequences where the contact between these rocks are weathered and not affected by deformation (Fig. 3). Isotopic composition of organic carbon is δ13CVPDB organic = −26.02‰ (sample 64) and that of the calcite veins in the same sample 1.4‰ for δ13CVPDB and -6.6‰ for δ18OVPDB (Table 1). The samples are characterized by a TOC contents from 153 to 647 ppm and low HC concentrations (1–24 ppm) (Table 2); bitumen extracts are dominated by elemental sulphur, but HCs include n-alkanes, PAHs (P, Fluo, MPs) and steranes (Table 2).

Interpretation and discussion

Traces of OM with a composition consistent with a marine origin were found in the serpentinized exhumed mantle. The generally low and variable amounts of TOC reflects the large lithological diversity of the Totalp area, and the distributions of hydrocarbons are consistent with the temperature history of the Totalp unit (i.e. no metamorphic overprint) (Table 2; Fig. 5).

Source of OM

A cross-plot of Pristane (Pr) to n-C17 versus phytane (Ph) to n-C18 is commonly used to determine the depositional environment of OM in sedimentary rocks (Peters et al. 2005b). For the Totalp samples (Fig. 7), this cross-plot implies a reducing (anoxic) depositional environment for the OM, with a marine source of planktonic algal/bacterial OM consistent with a marine mixed transitional environment that might be expected at this fossil OCT. Sterane ternary diagrams are also commonly used to provide information on the source of OM in sedimentary rocks (Peters et al. 2005a). Comparison of Totalp steranes with predicted distributions of source materials (Fig. 8) are consistent with a mixed marine source of planktonic algal and bacterial OM (Gonçalves et al. 2013; Wójcik-Tabol and Ślączka 2015) and are similar to OM deposited in marine settings during and since the Jurassic (Grantham and Wakefield 1988; Wójcik-Tabol and Ślączka 2015). Such a source for OM in the radiolarian cherts reflects the dominant planktonic signature of coccoliths and nanoconids (Manatschal et al. 2003). The variability in the sterane distributions most likely reflects spatial and temporal variability in environmental conditions during OM deposition.

Fig. 7

Plot of pristane/n-C17 versus phytane/n-C18 for Totalp samples used to identify depositional environment and OM type (after Peters et al. 1999)

Fig. 8

Sterane ternary distribution of the analysed samples for the αββ steranes of Totalp samples. The interpretation of depositional environment is from Patrycja Wójcik-Tabol and Ślączka (2015)

In five samples (ophicalcite, limestone and samples from the sulphide bearing outcrop) with enough TOC to allow measurement of its stable isotopic composition, the determined values of δ13CVPDB organic of ca. −26.2 to −27.4‰ (Table 2) are again consistent with an origin from marine OM (−26 ± 7‰) (Schidlowski 1988; Hayes et al. 1990) and are similar to those found in hydrothermal systems from the Galapagos (δ13C = −27.4‰) and the Guaymas Basin (δ13C = −25 to −21‰) (Orem et al. 1990). Orem et al. (1990) argued that the OM in these hydrothermal systems derived from chemoautolithotrophic bacterial production. The carbon isotopic composition of methane in modern hydrothermal vents ranges from −8.8 to −19.6‰ (e.g. TAG 26°N −8/−9.5‰, Rainbow 36°14′N −15.8‰, see Charlou et al. 2002; Lost City 30°N −13.6 to −8.8‰, Kelley et al. 2005; Bradley and Summons 2010). Fixation of hydrothermal methane by methanotrophs would be expected to lead to OM more depleted in 13C by 15–30‰ (Summons et al. 1994; Schidlowski 2001; Templeton et al. 2006), i.e. in the range −23.8 to −34.6‰ assuming the most conservative fractionation. Hence, isotopic data from the Totalp samples suggests that there could be a contribution from methanotrophic biomass; however the values are also consistent with marine-derived OM. Taken together with the molecular data and in the absence of specific methanotrophic biomarkers (e.g. crocetane), we consider that the Totalp hydrocarbons derive from marine OM.

Thermal history of OM

The distributions of PAHs are in part consistent with a high temperature origin (e.g. Killops and Massoud 1992), for example with pyrolytic residues (e.g. Geissman et al. 1967) arising from OM alteration by hydrothermal activity (Kawka and Simoneit 1990) or low-grade metamorphism (Heymann et al. 2003). Hence, the methyl-PAH/PAH ratios of ≤0.8 observed in our samples are consistent with a pyrogenic source (Saha et al. 2009). However, the Fluo/Pyr ratio <0.6 of all the samples is lower than what would be expected of an exclusively pyrolytic source and indicates that lower temperature pathways of PAH formation also contribute to the HCs (Fabiańska et al. 2016). The biomarker maturation parameters of C27 steranes fall within values that might be expected within a temperature envelope consistent with a moderate thermal history (Fig. 6; ca. 80–150 °C; Mackenzie et al. 1980; Peters et al. 2005a) and are therefore consistent with the temperature history of the basin (Früh-Green et al. 1990; Peters et al. 2005b). This suggests that where steranes are present, their degree of isomerisation reflects gradual maturation over time, rather than the pyrogenic process that may have yielded PAHs at the contact of hot rock with seawater OM.

Origin of calcite veins

The measured carbon and oxygen isotopic composition of carbonates are 0–2‰ and −11.7 to −6.2‰, for δ13CVPDB and δ18OVPDB, respectively and are similar to values previously reported for calcite veins in ophicalcite and late calcite veins collected in the Davos-Parsenn and Arosa areas (Fig. 4) (Früh-Green et al. 1990). The δ13CVPDB values are consistent with seawater-derived early diagenetic calcite (Fig. 4a) (Hudson 1977; Coleman et al. 1993; Heydari 1997). The δ18OVPDB values of the calcite veins for the majority of samples vary between −11.7 and −6.2‰ and indicate calcite precipitation during shallow burial (<250 m), not influenced by organic carbon derived CO2 but typical of Cretaceous calcite (Dix and Mullins 1992; Heydari 1997). One sample (radiolarian chert) has a negative calcite carbon isotope value perhaps indicating the influence of CO2 delivered from diagenesis of OM (Heydari 1997).

OM in serpentinite–mechanism of emplacement

The occurrence of HCs in the serpentinite rocks of Totalp is at first sight surprising. Schwarzenbach et al. (2013) listed the five main sources of organic carbon (OC) that can be preserved in basement rocks, namely: seawater, mantle, Fischer–Tropsh-like reactions (F–T), in situ production from microbial activity in the basement rock, and, thermogenic decomposition of OM. The hydrocarbons recovered from the Totalp serpentinites and the OC have isotopic compositions consistent with an origin from marine OM, i.e. from a seawater source rather than from in situ production or abiotic F–T reactions. Therefore, the probable origin of the OC preserved in the rocks is from dissolved and particulate organic carbon (DOC and POC) derived from seawater or thermal alteration of OM in sediments that then migrated to the basement rock within fluids (Fig. 9a). However, there could be different pathways of emplacement of OM in the serpentinites.

Fig. 9

Conceptual model explaining origin and migration of OM from the seawater into different lithologies in the Totalp unit. a The OM is represented by particulate and dissolved organic matter (POM and DOM, respectively). The OM infiltrates the basement rock by rock-fluid circulation. b Some OM may be deposited within the carbonate veins (e.g. calcite veins). c OM circulates with fluids through fractures and porosity of sediments to migrate into the basement rock. d OM is preserved at the surfaces and in the interlayer surfaces of clay minerals in the sediments

The OM could have been deposited within the two types of precipitated carbonate found in the serpentinite, namely the mechanically deposited carbonate that fills fractures, or via pore fluids fuelling the formation of calcite veins (Fig. 9b; Bernoulli and Weissert 1985; Früh-Green et al. 1990). The latter has an isotopic composition consistent with seawater carbonate and any DOM transported with the pore fluids would be trapped within the calcite matrix on precipitation (Figs. 4 and 9b). The presence of ophicalcite and the numerous calcite veins from the time of exhumation indicates a high supply of dissolved inorganic carbon (Ménez et al. 2012). As the OM clearly has a marine origin, it could have been emplaced by the first main phase of fluid-rock interactions at the ocean floor and the tectono-sedimentary and hydrothermal processes described by Früh-Green et al. (1990). The OM may have migrated with seawater through fractures in the sediment into the basement rock (Fig. 9c; Delacour et al. 2008). These fractures formed by tectonic and crystallization stresses, which are not reliant on matrix permeability (Farough et al. 2016). Where initial contact between DOM-containing fluid and rock was at relatively high temperature, this could have led to the formation of the “pyrolytic” PAHs.

With respect to the sedimentary facies, organic carbon preservation is linked to grain size (or mineral surface area) and oxygen exposure after deposition (Fig. 9d; Hartnett et al. 1998; Kennedy et al. 2002). Clay minerals, one of the constituents of shale sediments found in the Totalp unit, strongly retain DOM both on the external surfaces and interlayer spaces of clay particles (Kennedy et al. 2002). However the Totalp sediments have low TOC values and could been highly oxidised during deposition or diagenesis. During deposition of shales, OM is also deposited as discrete biogenic particles, but largely these are not preserved; rather clays, particularly smectites, facilitate the absorption of DOM and POM from seawater and pore-fluids, and preserve it during burial (Kennedy et al. 2002).

In summary, OM in the exhumed mantle rocks at Totalp is of marine origin that migrated into the serpentinite most likely from the overlying seawater or sediment cover (Simoneit et al. 1978; Simoneit and Philp 1982). Our results are consistent with previous studies that show a lack of, or only minor formation of the CH4 and H2 needed for the production of OM involving serpentinization at low-temperature (McCollom and Donaldson 2016) and that the molecules necessary for life at hydrothermal systems are formed during the abiotic degradation of existing OM at low temperatures on the ocean floor (Reeves et al. 2014).


We provide evidence for the preservation of traces of OM originally deposited in a reducing marine environment in serpentinized mantle rocks and overlying sediments, but with no indication that the OM was generated from methanotrophic bio-systems. The presence of OM within serpentinized mantle raises two questions; how much is there and how is this OM distributed in depth? Drilling to recover rock cores from the Totalp area would allow sampling of serpentinized mantle deeper than surface outcrops and would shed light on the depth distribution of OM and its composition.



Dissolved organic matter


Gas chromatography


Gas chromatography–mass spectrometry




Hydrochloric acid


Ocean-continent transition


Organic matter


Polynuclear aromatic hydrocarbons





















3,2,1 and 9 MPs:

3-,2-,1- and 9-methylphenanthrene


Particle organic matter


Particle organic carbon


Parts per million (1 ppm = 1 mg/l; 1 mg/kg)


20S 13β(H),17α(H)-diacholestane


20R 13β(H),17α(H)-diacholestane


20S 13β(H),17α(H)-diacholestane


20S 13β(H),17α(H)-diacholestane


20S 24-methyl-13β(H),17α(H)-diacholestane


20R 24-methyl-13β(H),17α(H)-diacholestane


20S 5α(H), 14α(H), 17α(H)-cholestane


20R 5α(H), 14α(H), 17α(H)-cholestane


20S 5α(H), 14α(H), 17α(H)-cholestane


20R 5α(H), 14α(H), 17α(H)-cholestane


20S 24-methyl-5α(H), 14α(H), 17α(H)-cholestane


20R 24-methyl-5α(H), 14α(H), 17α(H)-cholestane


20S 24-methyl-5α(H), 14α(H), 17α(H)-cholestane


20R 24-methyl-5α(H), 14α(H), 17α(H)-cholestane


20S 24-ethyl-5α(H), 14α(H), 17α(H)-cholestane


20R 24-ethyl-5α(H), 14α(H), 17α(H)-cholestane


20S 24-ethyl-5α(H), 14α(H), 17α(H)-cholestane


20R 24-ethyl-5α(H), 14α(H), 17α(H)-cholestane


Total organic matter


Total carbon


X-ray diffraction


Permille symbol


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The Margin modelling program MM3 is acknowledged for funding. A. Thompson, S. Crowley, S. Blackbird, G. Harriman, E. Fisher, J. Utley, N. Carr and S. Petev are thanked for scientific and technical assistance. Two anonymous reviewers and the editor Stefan Schmid are thanked for their helpful comments that improved the manuscript.

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Mateeva, T., Wolff, G.A., Manatschal, G. et al. Preserved organic matter in a fossil Ocean Continent Transition in the Alps: the example of Totalp, SE Switzerland. Swiss J Geosci 110, 457–478 (2017).

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  • Serpentinization
  • Organic matter
  • Totalp unit
  • Biogeochemistry
  • Ocean Continent Transition (OCT)